PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000679.1_g030.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 498aa MW: 55663.7 Da PI: 4.5917

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000679.1_g030.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.6	3.4e-25	63	181	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +l ++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ d kya++ r nrat +g+Wk tgk ++v Pav_sc0000679.1_g030.1.mk 63 QLFRCFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRLDYKYANSPRCNRATGKGFWKITGKPRQV 143 678899*****99666...**********8444553333778******************************** PP NAM 93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++++ k+tL+f++gr +k+++t Wv +ey+l Pav_sc0000679.1_g030.1.mk 144 KSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYNL 181 866566677889**********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MSSSMSTTTE ESVHDLLPKF RFHPSEEEMV NLLMKKVEGQ DSQAMPDEIV YKPSDLPDNE 60 SIQLFRCFLK RMMQGKASQS IPEIDVYKYE PWDLAELMFP DSPYQPRAWF SFSRLDYKYA 120 NSPRCNRATG KGFWKITGKP RQVKSRQLPK SVTCKKRTLT FHEGRVSKSR NTGWVRQEYN 180 LTPTDPGSNP NQLSGFVLCR MKNKSTDNES DNKKQQDVSI CVESADPGIA GCMASNSELD 240 QAAGIHLIPE AEEHLTYKEL EHVLLESGNQ NDGEPGGFVS SDFDDMIQEL CAKGGEYLDS 300 PSPPERPRQH QLPQLGNVPV TGDYISSNSN NQAAAINHMI PHPEEFLAYK EVEHVPLGSC 360 NPDAGEPGGC VSSNMLQKIC AQLGEELDSP FPPPGPPELG NAPYVYTDEC SSWPSPIGDN 420 DSSLPNKNSI PTNYYSKPVS NTASNFENQT RSSEVYSQAE ENLESFFRQF ELEGDFLHAN 480 NYIGCNESQY ATLFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MSSSMSTTTE ESVHDLLPKF RFHPSEEEMV NLLMKKVEGQ DSQAMPDEIV YKPSDLPDNE  60
SIQLFRCFLK RMMQGKASQS IPEIDVYKYE PWDLAELMFP DSPYQPRAWF SFSRLDYKYA  120
NSPRCNRATG KGFWKITGKP RQVKSRQLPK SVTCKKRTLT FHEGRVSKSR NTGWVRQEYN  180
LTPTDPGSNP NQLSGFVLCR MKNKSTDNES DNKKQQDVSI CVESADPGIA GCMASNSELD  240
QAAGIHLIPE AEEHLTYKEL EHVLLESGNQ NDGEPGGFVS SDFDDMIQEL CAKGGEYLDS  300
PSPPERPRQH QLPQLGNVPV TGDYISSNSN NQAAAINHMI PHPEEFLAYK EVEHVPLGSC  360
NPDAGEPGGC VSSNMLQKIC AQLGEELDSP FPPPGPPELG NAPYVYTDEC SSWPSPIGDN  420
DSSLPNKNSI PTNYYSKPVS NTASNFENQT RSSEVYSQAE ENLESFFRQF ELEGDFLHAN  480
NYIGCNESQY ATLFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-30	NAC family protein