PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000648.1_g240.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 650aa MW: 74308.9 Da PI: 8.5521 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.9e-09 | 593 | 637 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ Pav_sc0000648.1_g240.1.mk 593 VWSAVQERALVQALKTFPKEasqRWERVAAAVP-GKTVNQCKKKFT 637 6********************************.*********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 650 aa Download sequence |
MNVQSKFHLI SYSQELVDGQ PVYVSSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA 60 DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR 120 ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF 180 DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEVDSFY DFWYTFKSWR 240 EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLVDNAYK RDPRIVRRKE 300 AEKAEKQRKK EAKYLAKKLQ EEEAARAVEE EKRRKEEEEK RAAEIALQQK KLKEKEKKLL 360 RKERSRLRTL SGPVISNRLL SLAEDDVESL CMSLDIEQLR NICERMEGKE GLERAEVLRE 420 ACGYKNDLEG KKEDEKKTLQ QNGSAETNGT VLLGSYEKKE KPWSREEIEL LRKGMLKFPK 480 GTSRRWEVVS DYIGTGRSVE EILKATKTVL LQKPDSSKAF DSFLEKRKPA PSIASPLTTR 540 IEVEGVLTPP QGTGTPAEKV DKSGESSSGS TKDQNPNDPI AENGVSSGSE QDVWSAVQER 600 ALVQALKTFP KEASQRWERV AAAVPGKTVN QCKKKFTLLK ESFRNKKSSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 332 | 355 | KRRKEEEEKRAAEIALQQKKLKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |