PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000622.1_g660.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 378aa MW: 42255.6 Da PI: 4.4394 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.1 | 9.7e-25 | 10 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknrat 78 lp+Gf+F+P+d++l+ +yL +kv+g+++ ++vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r r++ Pav_sc0000622.1_g660.1.br 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeygghN-LATGEDLYFFTKLKSLSDKDSRVARTI 92 79**************************99999*****99568*****74244422.2356689******************** PP NAM 79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 sg+Wk + ++v + ++++ g+ k + + + ++ + W+mhey+l Pav_sc0000622.1_g660.1.br 93 GSGTWKGENSGTTVSDPknEENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142 ******999999999885566679999998886..566667999******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MAPSESVVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE 60 YGGHNLATGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE NSGTTVSDPK NEENDLGIWK 120 RFHYENPKSV QDGCWIMHEY SLHPSLVNPK PNSTNQFVLC RIRKNDKGKR KLRTAEEDNE 180 TDTPVQSQNK RQRPQQVTSF EEFIGNCTPM SEATGISGSV SYLPTGLTQS QPDSSFAYPR 240 TVVSSQARAN YTDDVSQFHG GSDGDALMSD FSHLDTAQPF TEQAMGSYAV CNQERVSDVY 300 ETQQGLGLTD NNIGYWPSPF GSEEDQVNAL DVSIDYDLLI HLINCDDGPQ QSSTAQFMGM 360 GMENTTSASS EANMVIID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 2e-18 | NAC family protein |