PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000567.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 155aa    MW: 17551.2 Da    PI: 4.7212
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000567.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.28.9e-191665148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                               +g+WT+eEd +l+++++ +G ++Wkt+a+  g   gRt++++k++w+++l
  Pav_sc0000567.1_g060.1.mk 16 KGAWTAEEDRKLAEYIEIHGAKRWKTVASIAGrlPGRTDNEIKNYWNSHL 65
                               79*********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MAPKKNDGST KRIMNKGAWT AEEDRKLAEY IEIHGAKRWK TVASIAGRLP GRTDNEIKNY  60
WNSHLSKKIN HNEKTLQNSR AQETATPSQK DSGTEGDEEE EGGGKESVNN SDLNFDVNEF  120
FDFSAEGSYG LEWVNKFLEL DEDTMNYSEK VSNII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.14e-15MYB family protein