PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000480.1_g1200.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 311aa MW: 35400.1 Da PI: 6.0733

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000480.1_g1200.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	64	4.5e-20	8	140	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr. 76 GfrF+Ptd+el++++L kk+ +k+ +++++e++ + ++ePw ++ + ++++yfF++ ++ +++gkr +r Pav_sc0000480.1_g1200.1.mk 8 LGFRFRPTDQELLSYFLYKKAITKDplmaSYYSNFVHEFNfLGETEPWVVWDQFGGpglVDEDLYFFTQLKNLSQKGKRIKRk 90 6*****************8888867643334579999736799*74443333367899**************5 PP NAM 77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + g+W++ ++ +v++k +g+ +g k+ L + + + ++ +W+++ey+l Pav_sc0000480.1_g1200.1.mk 91 IEAGGTWSEAFSK-KVYDKtTGNPIGQKRNLRYEN--QGCEHHGKWLLEEYSL 140 55589998875.5555549999******984..4444589*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MAKYNRLLGF RFRPTDQELL SYFLYKKAIT KDPLMASYYS NFVHEFNFLG ETEPWVVWDQ 60 FGGPGLVDED LYFFTQLKNL SQKGKRIKRK IEAGGTWSEA FSKKVYDKTT GNPIGQKRNL 120 RYENQGCEHH GKWLLEEYSL LDKEAQKIVL CRLKKNSRVS NKRNNSTQEF KEKPSNKKAR 180 KELASATVKI DAEEPQTSSS LSSVVNNHDQ ELIFDINYNA ISNYLCGDDQ DNIDDPFDYG 240 CVTDEEFAIG MDALLGTPPL SQELPHMGET LQALDALLDV SSSSLDSPVV VLARVRFLKK 300 IVDIASISLI L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-09	NAC family protein