PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000464.1_g080.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 401aa    MW: 44288.8 Da    PI: 7.1607
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000464.1_g080.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.71.8e-11248272226
                    G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                                pr+rWt++LH+rFv+ave LGG+e+
  Pav_sc0000464.1_g080.1.mk 248 PRMRWTSTLHARFVHAVELLGGHER 272
                                9*********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MPLEGIFIEP SSTTTSPLPD LSLHISPPNT SSSSSSIFNT TSSEPQISTT NSQAHTELSL  60
GRCFTGGAHE EPPQNPYHHH QQQSLPLYRS SNHLSHINNG VSLLDVSSSE GLRPIKGIPV  120
YQNRPFPFLP TENMIPRDHP KDSKMCFYQR PPPSYNLPSL PSASCSSNTP STPYFGGGLD  180
PMSRFNGFSS MDPFKSNNQL HHHHHLHHLH HNQYGIGGVG PISEASHHGI MRSRFLPKLP  240
TKRSMRAPRM RWTSTLHARF VHAVELLGGH ERQSDGSGED DILSPIGSAT DLHGLRSPHQ  300
FPDQRGPSDR SSGQPDLDYT SSTTLWSNSS SSREAFPHTS SHDMDGLTPV SSQLQKISGH  360
QIQECDSTTQ LKSYLGSNFE TRNPSLEFTL GRPDWNGKPH D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.12e-35G2-like family protein