PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000350.1_g1100.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 213aa MW: 24730.5 Da PI: 5.4205 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 54.5 | 3.9e-17 | 8 | 64 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........k 50 +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd++ k Pav_sc0000350.1_g1100.1.mk 8 VPPGFRFHPTEEELVGYYLKRKINSLQIDL-DVIIDIDLYKIEPWDIQGwvvcrafkK 64 69****************************.99**************84455554440 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MDHMESCVPP GFRFHPTEEE LVGYYLKRKI NSLQIDLDVI IDIDLYKIEP WDIQGWVVCR 60 AFKKPSPSHR QGFEALKHAY YIREHNSHAS SSNFGSEMHM VNPSQGFQYQ SFGLDQQDHL 120 ISNHIFMGNQ IIELPQLESP SISTSLTNKQ SVHEQQNNNI TTEHYDDQRS NMNSSDQHID 180 WRNLDSLLEV PLIPQNYEQE AQNHHLLGCF PGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 2e-17 | NAC family protein |