PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000348.1_g640.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 245aa MW: 28011.2 Da PI: 10.709 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.9 | 6.4e-12 | 28 | 81 | 41 | 98 |
TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 41 esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +s +W v++ +k +++++++kGWk+Fv++n+Lk +f+vF g+ +f +v ++ Pav_sc0000348.1_g640.1.mk 28 TSAGTWPVNV--KKADNKFFFEKGWKKFVHDNDLKLCEFLVFGCAGDLGF--YVDIYG 81 46689*****..*******************************8887666..887765 PP | |||||||
2 | B3 | 32.5 | 1.6e-10 | 164 | 220 | 15 | 75 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT-- CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk 75 +lp++f+++h e+ t+tl+ ++g++W vkl +++ +g+ l++G F+++n+Lk Pav_sc0000348.1_g640.1.mk 164 FKYLPRNFVKTHLT--EQRATVTLRVSDGKTWPVKLVFEGVRGK--LGAGFMAFCRDNNLK 220 468*******9953..36679***************99999888..9*************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MFQKGQIPPA FLVHFEGGKV PQKSHLWTSA GTWPVNVKKA DNKFFFEKGW KKFVHDNDLK 60 LCEFLVFGCA GDLGFYVDIY GRNGCKREFV TAKRDRPHEE GHGIVIYRRS PRHHGKQNLP 120 SVDPIKYEAT DTESETPMHP LAISTGKTIP LQRNNSFNSG KPFFKYLPRN FVKTHLTEQR 180 ATVTLRVSDG KTWPVKLVFE GVRGKLGAGF MAFCRDNNLK LSFTARQKLQ VAPHHQASKS 240 RRRIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 3e-13 | B3 family protein |