PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000311.1_g1150.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 197aa MW: 21948 Da PI: 4.8918 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31 | 5.9e-10 | 28 | 54 | 2 | 28 |
SSS-HHHHHHHHHHHHHTTTT-HHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIa 28 + WT+eEd++l+++v+ +G g+W+tI Pav_sc0000311.1_g1150.1.mk 28 NLWTPEEDLILKKYVETHGEGNWATIV 54 56***********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MDKKRSSSSV VTWKTAAANA NAQAPKKNLW TPEEDLILKK YVETHGEGNW ATIVTNKKKK 60 NKISTTTTTC IDRTDDDHDQ IQKKDATDFD HDHDHRQEPN GSNPTSSASC YYYDINDMVE 120 SPIFTSHHDC LQYLPTNLNA TFLFDHDEPF IAADAASSSS YFDSFLFFEA FGSSAAATAA 180 DMESVSPLAC ADHHLGW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 2e-09 | MYB family protein |