PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000271.1_g090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 389aa MW: 43568.5 Da PI: 6.1002

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000271.1_g090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.1	3.7e-49	17	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgy 82 + pGfrF+Ptdeel+++yLk+k+eg + + evi+evdi+++ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+ +y Pav_sc0000271.1_g090.1.mk 17 MFPGFRFSPTDEELISYYLKNKLEGPEpGKSVEVIPEVDICNFEPWDLPaKSVIQSDNEWFFFSPRGRKYPNGSQSRRATEFSY 100 579********************996444589***********667777899********************** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatgk+++v+s +++++g+k+tLvf+ grapkge+t+W+mhey + Pav_sc0000271.1_g090.1.mk 101 WKATGKERNVKS-SSNVIGTKRTLVFHMGRAPKGERTEWIMHEYCM 145 ********.999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MGAVSKEAQL SIAASSMFPG FRFSPTDEEL ISYYLKNKLE GPEPGKSVEV IPEVDICNFE 60 PWDLPAKSVI QSDNEWFFFS PRGRKYPNGS QSRRATEFSY WKATGKERNV KSSSNVIGTK 120 RTLVFHMGRA PKGERTEWIM HEYCMNDKSQ DSIVVCRLRK NSDFRLNDTT NGGSSSRSPL 180 STVHNSENAV SEVGIDHDKP VECYSKKSTS SHDSHSTEQI DSASESNQKQ TTEVTQAESS 240 GHQMDSYDDD FYADILNDDI IRLDEASASA SADILPVLAN KSEAEQNSHQ PMQAICNSEA 300 IPFQGTANRR IHLRKRKEKF PAESLEGPNS QESPKTSADR MDDQHMLLYV IIIILVLLAL 360 FLSKFCFTDN AGSVSFLVGR FLSSQKHHK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MGAVSKEAQL SIAASSMFPG FRFSPTDEEL ISYYLKNKLE GPEPGKSVEV IPEVDICNFE  60
PWDLPAKSVI QSDNEWFFFS PRGRKYPNGS QSRRATEFSY WKATGKERNV KSSSNVIGTK  120
RTLVFHMGRA PKGERTEWIM HEYCMNDKSQ DSIVVCRLRK NSDFRLNDTT NGGSSSRSPL  180
STVHNSENAV SEVGIDHDKP VECYSKKSTS SHDSHSTEQI DSASESNQKQ TTEVTQAESS  240
GHQMDSYDDD FYADILNDDI IRLDEASASA SADILPVLAN KSEAEQNSHQ PMQAICNSEA  300
IPFQGTANRR IHLRKRKEKF PAESLEGPNS QESPKTSADR MDDQHMLLYV IIIILVLLAL  360
FLSKFCFTDN AGSVSFLVGR FLSSQKHHK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	319	RKRKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	3e-91	NAC family protein