PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000257.1_g760.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 282aa    MW: 30468.8 Da    PI: 7.2179
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000257.1_g760.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.89.2e-3266122259
                ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                                + vrY+eClkNhA+s+GghavDGC+Ef+++ g+egt++al CaAC+CHRnFHR+e+e 
  Pav_sc0000257.1_g760.1.mk  66 TMVRYRECLKNHAVSIGGHAVDGCCEFLAA-GDEGTMDALICAACNCHRNFHRKEPEG 122
                                579**************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MEFEEHEEHE EEMEMEMQAA PPGYDSTAAS SRVKMGPTRE GTVSTARKRG ATSTAATTNT  60
TTTLTTMVRY RECLKNHAVS IGGHAVDGCC EFLAAGDEGT MDALICAACN CHRNFHRKEP  120
EGELIHHHQG GTTGPYHQSG GPHHHLLQHQ FSSGFYRPPP PPSGYLITSP HARPTLALPA  180
ASGGGGGSHS REDGEDVSNP SSSGGGGGGG GGFGINKKRH RTKFTHEQKE KMLEFAEKVG  240
WRIQKHDEAA VEEFCGETGV KRQVLKVWMH NNKHTLGKKL GP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-65ZF-HD family protein