PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000244.1_g070.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 291aa    MW: 33796.7 Da    PI: 7.5914
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000244.1_g070.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.83.1e-47181443128
                        NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                                pGfrFhPt+eel+ +yLk  v gk+ ++ ++i  ++iy+++PwdLp   k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkat
  Pav_sc0000244.1_g070.1.mk  18 PGFRFHPTEEELLEFYLKSVVLGKRQRF-DIIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKAT 100
                                9************************888.99***************8778899******************************* PP

                        NAM  87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                g+d++++s    ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl
  Pav_sc0000244.1_g070.1.mk 101 GSDRKIVSLsdPKRIIGLRKTLVFYKGRAPRGTKTDWVMNEYRL 144
                                ******997666778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MAANTKDQEQ MTPEFELPGF RFHPTEEELL EFYLKSVVLG KRQRFDIIGF LNIYHHDPWD  60
LPGLSKIGER EWYFFVPRDR KHGSGGRPNR TTETGFWKAT GSDRKIVSLS DPKRIIGLRK  120
TLVFYKGRAP RGTKTDWVMN EYRLPDNCHY LKDIVLCKIY RKATSLKVLE QRAAMEEEIK  180
NIHASPNTSS PPTSMETISF CSQPQEDLTL QMPKNYVVLK QEMEDASLTE AKEPKEEKAM  240
EIKGSPPPPT YILPELQVPR LSMDWTQDTF WTQMNSPWLQ SLTPLPNLLN F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-113NAC family protein