PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000220.1_g1440.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 348aa    MW: 38033.4 Da    PI: 9.4628
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000220.1_g1440.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.38.7e-3462119258
                 ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                                 ++v YkeClkNhAaslGgha+DGCgEfmps++++  ++++lkCaACgCHRnFHRr+++
  Pav_sc0000220.1_g1440.1.mk  62 MAVAYKECLKNHAASLGGHALDGCGEFMPSPSSNpMDPTSLKCAACGCHRNFHRRDQH 119
                                 5799******************************9********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MDFTSANHLT PTATTIKTPD TDTEPPSPSE PKSISNRSLS FPNGSLKPHH PTIPPPQPPP  60
TMAVAYKECL KNHAASLGGH ALDGCGEFMP SPSSNPMDPT SLKCAACGCH RNFHRRDQHR  120
PKNVLSHHRL LLPAPPTHHQ HHHSSSPSPT QSPVSSQGPT LSPQSPPPVS HLPPSYFASP  180
PQMLLALSNG VSGPSDGHHH GLHPTTMKAE KYPNEKKRSR TKFSQEQKEK MNLFAEKVGW  240
RMQRSDERLV EDFCNEVGVR RGVFKVWMHN NKHGLKKRSE RSGDGGERMI ISNVKYETSN  300
GDDESCGRVG FDSIVNAQTT SYNVNAIPQN GGTRASFHLS NNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.15e-59ZF-HD family protein