PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000220.1_g1030.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 22965.9 Da PI: 4.4814 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.3 | 5.3e-18 | 9 | 56 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lppGfrFhPtdeel+++yLk++++++++++ ++i+evd+yk++Pw+Lp Pav_sc0000220.1_g1030.1.mk 9 LPPGFRFHPTDEELIMFYLKNQATSRPCPV-SIIPEVDLYKFDPWQLPV 56 79****************************.89**************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEAKHSSELP PGFRFHPTDE ELIMFYLKNQ ATSRPCPVSI IPEVDLYKFD PWQLPVCDIT 60 LLDDWVLCRI YKKRHLGKAY LDQKVEEEDP ITDPKIEITA ANDHEEQMML KFPRTCSITS 120 LLDMDYLAPI SQLLSENSSY DFQNNLASAG NAGHAQMFQF GEMPYQSTTD SAKFQVTQSC 180 PSNQPWFANP VYNFNGLDRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 2e-27 | NAC family protein |