PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000207.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 367aa    MW: 41737.2 Da    PI: 6.5087
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000207.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.4e-11268298131
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartm 31 
                                +g+WT+eEd ll+++vk++G g+W+++ar  
  Pav_sc0000207.1_g020.1.mk 268 KGPWTAEEDGLLIEYVKLHGEGRWNSVARLA 298
                                79**************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MVIRNLLCHF ESLHLWHYVF IGPESDFLFD LARRGHPVIG TDQFLRSVGA YKLMSFQDSN  60
VEMIKEVLVK AYVLKKCLES RHNSWVVDGN MLPVNSDLFI ESDPSYDFYV GKSSELFFAR  120
RSSSARNIGG NDFISKFAMM VNSLLAKRHS LSFGYIMAKF LEQKGVRVKN LDETSLGLRI  180
GNSNVNQSLG DGKQMVFWSS DMASDLLQKR LQELGIWIVN DDFSCKAVVC HKHDSHLPNL  240
QKEILEPSWM TAGHHMGWGR IEEEGWRKGP WTAEEDGLLI EYVKLHGEGR WNSVARLAVK  300
QGMETISTYP HHTTDHQEQG FYYSMLNGNV SVPEASNNED NFLWDGLWNL NDVHGNFSST  360
CATGKAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.12e-16MYB family protein