PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000206.1_g710.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 847aa MW: 92003.4 Da PI: 4.6083

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000206.1_g710.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.4e-09	797	845	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l +v+++G g+Wk I + + Rt+ ++k++w++ Pav_sc0000206.1_g710.1.mk 797 KRWSLLEEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 845 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MDSDVDVSRW VLELLIRDRE KECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT 60 ETMLETLEMI EDLDISQGIA TTDSMKAAYL AVATECTVKF LVGLMGKPSG KYLEAVDRIW 120 RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA 180 LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKDANLGGG PEAEAQTKNG ANVGDRSELE 240 AQTENGANAG DGSELDAQMA NAADVGGESE LEAQMKNGAN VGGESDLEAQ MENGANVQMA 300 SGTNAVDGSE LEKEVVNETN AGDGSQLEVQ TTNGTNAAGE SVLEAQMVSG ANVGDGSELE 360 AHTVNGTNVG SESELEAQLL NGTNLGDGCE LQAQRVNEAN GSCRFELGPQ PMTGVQLQEV 420 GARRMPPTKS RDLVLNEMDS GFTNREVLRF GDDQVHETGV GLPSTNRELV LSFDPTTKDK 480 EIQRSTGLRY KHLAHRRTRG PVRIRDAEDL GTDLSNSKYD SLSTPEISNA QEALRSSILE 540 LQAVVTDPLP DALRVAETIR LDLAMKSVNV GAENLSVEKG AGPVQSHNDN LGNMSVPQSS 600 GKEKDVPTPP VNQGKGTESV QTDDANLGNP SSSNKNNVPR PMTDPLPDAL RVAETIRLDL 660 AMKSVNVGAE NLSVEIGAGP VQSHNDNLGN KSVPQSSGKE KDVPNPPVNQ GKGTESIQTD 720 DVNLGNPSSS NKNNASRPSL MERNTTAHTY EWDDSIDTSQ GAMKDPGRLH LPSPKRNAVS 780 PLKKYENKRF TKRRKAKRWS LLEEDTLRTG VQKYGAGNWK FILNSYREIF EERTEVDLKD 840 KWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MDSDVDVSRW VLELLIRDRE KECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT  60
ETMLETLEMI EDLDISQGIA TTDSMKAAYL AVATECTVKF LVGLMGKPSG KYLEAVDRIW  120
RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA  180
LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKDANLGGG PEAEAQTKNG ANVGDRSELE  240
AQTENGANAG DGSELDAQMA NAADVGGESE LEAQMKNGAN VGGESDLEAQ MENGANVQMA  300
SGTNAVDGSE LEKEVVNETN AGDGSQLEVQ TTNGTNAAGE SVLEAQMVSG ANVGDGSELE  360
AHTVNGTNVG SESELEAQLL NGTNLGDGCE LQAQRVNEAN GSCRFELGPQ PMTGVQLQEV  420
GARRMPPTKS RDLVLNEMDS GFTNREVLRF GDDQVHETGV GLPSTNRELV LSFDPTTKDK  480
EIQRSTGLRY KHLAHRRTRG PVRIRDAEDL GTDLSNSKYD SLSTPEISNA QEALRSSILE  540
LQAVVTDPLP DALRVAETIR LDLAMKSVNV GAENLSVEKG AGPVQSHNDN LGNMSVPQSS  600
GKEKDVPTPP VNQGKGTESV QTDDANLGNP SSSNKNNVPR PMTDPLPDAL RVAETIRLDL  660
AMKSVNVGAE NLSVEIGAGP VQSHNDNLGN KSVPQSSGKE KDVPNPPVNQ GKGTESIQTD  720
DVNLGNPSSS NKNNASRPSL MERNTTAHTY EWDDSIDTSQ GAMKDPGRLH LPSPKRNAVS  780
PLKKYENKRF TKRRKAKRWS LLEEDTLRTG VQKYGAGNWK FILNSYREIF EERTEVDLKD  840
KWRNMTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	9e-18	MYB_related family protein