PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000206.1_g390.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 614aa MW: 69596.5 Da PI: 10.1792

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000206.1_g390.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.9	3.9e-18	192	278	1	95
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k +++s+v + +l lp kf+e+h +k ++s +++lede+g++++ + +k+ + l++GW++F+ +++L++gD +vF+l Pav_sc0000206.1_g390.1.mk 192 FVKSMVRSHVYSCFWLGLPSKFCEDHLSK-TGS-EMVLEDEDGNEYDAVY--IGKRAG--LSGGWRGFALEHKLDDGDALVFEL 269 89**********************655.444.9***********..555544..9********************9 PP -SSSEE..EEE CS B3 85 dgrsefelvvk 95 ++ +f ++ Pav_sc0000206.1_g390.1.mk 270 TEPARF--KIY 278 765555..444 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
FNFILLTLSV RLRNNSTPHS LWFSETATFS LDQSDLAFSL LGQSDSKRKM VAAVDSFTAN 60 TYEEARNQRL EENKRKFQDL GISNISKTLT HLTASPNKSQ KRVSRPKAKN TCFDLEPRRS 120 SRQRNPIQSY RDDVDIGLPT LRKGSRKTSS SWGSYLARPI EEVRAASYEE RSAAFKAAEK 180 LQENLQTENP SFVKSMVRSH VYSCFWLGLP SKFCEDHLSK TGSEMVLEDE DGNEYDAVYI 240 GKRAGLSGGW RGFALEHKLD DGDALVFELT EPARFKIYIV KAYPMPSLES FKNNVDKEEI 300 TSAEKTSKAA MKTEPESNQK RRSKRGIVPE MDESQTSPES EPNQKRRSKR GTVPAMVDTK 360 TSPDSESIQK RRSERGVVLV MEDSKTSPVL EPNQRRRSKR GMVPEMDDTK TSPDSEPNQK 420 RRSKRGTVPT MVDTKTSPDS ESIQKRRSER VVVPMMEDSK TTPVLELNQR RRSKRGMVPV 480 MDDTKASPDS ELKQKQKSKR GIVPEMDDTK TSPKVLPDSP KGQEIEQEVS PMKKNEVAPK 540 QIRKKAKANR VRSTENPEGC EVQEASTESP EGCLVKQEAS TAETDSRVVK DEKECVARKP 600 RKKVVKERLF RKRA

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

FNFILLTLSV RLRNNSTPHS LWFSETATFS LDQSDLAFSL LGQSDSKRKM VAAVDSFTAN  60
TYEEARNQRL EENKRKFQDL GISNISKTLT HLTASPNKSQ KRVSRPKAKN TCFDLEPRRS  120
SRQRNPIQSY RDDVDIGLPT LRKGSRKTSS SWGSYLARPI EEVRAASYEE RSAAFKAAEK  180
LQENLQTENP SFVKSMVRSH VYSCFWLGLP SKFCEDHLSK TGSEMVLEDE DGNEYDAVYI  240
GKRAGLSGGW RGFALEHKLD DGDALVFELT EPARFKIYIV KAYPMPSLES FKNNVDKEEI  300
TSAEKTSKAA MKTEPESNQK RRSKRGIVPE MDESQTSPES EPNQKRRSKR GTVPAMVDTK  360
TSPDSESIQK RRSERGVVLV MEDSKTSPVL EPNQRRRSKR GMVPEMDDTK TSPDSEPNQK  420
RRSKRGTVPT MVDTKTSPDS ESIQKRRSER VVVPMMEDSK TTPVLELNQR RRSKRGMVPV  480
MDDTKASPDS ELKQKQKSKR GIVPEMDDTK TSPKVLPDSP KGQEIEQEVS PMKKNEVAPK  540
QIRKKAKANR VRSTENPEGC EVQEASTESP EGCLVKQEAS TAETDSRVVK DEKECVARKP  600
RKKVVKERLF RKRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	7e-72	B3 family protein