PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000157.1_g650.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 692aa MW: 79830.7 Da PI: 6.2681

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000157.1_g650.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.6	2.3e-24	71	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkl 81 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke +w+v+++ Pav_sc0000157.1_g650.1.mk 71 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVMQWYVSQF 153 69******************8888.**************************************998766779** PP FAR1 82 eleHnHela 90 ++ HnHel Pav_sc0000157.1_g650.1.mk 154 SNVHNHELL 162 *****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MAMKPSNNIW IRRQQCPCGD WKCYIQYEGD DLGSVSSQYV KSETTPSSSS SEAVFTPYVG 60 QIFKTDDDAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYRSGFN QPRKKANVEH 120 PRERKSVRCG CDAKLYLTKE IVDGVMQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEVD 180 QERILLLSKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV QESDALLNEK 240 RENDLLELLE ACKAMTGRDP DFVYDYTLDE NEKVENIAWS FGDSICAYTI FGDVVAFDTT 300 YRSVTYGLLL GVWFGIDNHG KAIFLGCVLL QDESSHSFAW ALQAFMRFMR GRHPQTILTD 360 IDSGLRDAIA RELPNTKHVL CIWHILSKIS SWFSLPLGSQ YENFKPEFDM LSQLESVEDF 420 EHQWNILVAR FGLVSDKHIA LLYSYRASWT FSYIRSYFLA RTLTAEFSLS LESFLKRILN 480 GQTCLQVFFE QVSIAANLEN RTREGMQYMH VKTGMPLEEH ARNILTPYAF NVLQHEIVLS 540 LQYATTEMAN GSYLVRHYKK LDGECLVIWM PDDEQIHCSC KEFEHSGILC RHSLRVLVVK 600 NYFQLPEKYF LLRWRVESSL VSVDDQNAQI SSDDCAQAFH SLTASLLTES LISKDRFNYV 660 HSELTSLLEH VRNMPVINEY AANAAANNIS ES

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MAMKPSNNIW IRRQQCPCGD WKCYIQYEGD DLGSVSSQYV KSETTPSSSS SEAVFTPYVG  60
QIFKTDDDAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYRSGFN QPRKKANVEH  120
PRERKSVRCG CDAKLYLTKE IVDGVMQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEVD  180
QERILLLSKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV QESDALLNEK  240
RENDLLELLE ACKAMTGRDP DFVYDYTLDE NEKVENIAWS FGDSICAYTI FGDVVAFDTT  300
YRSVTYGLLL GVWFGIDNHG KAIFLGCVLL QDESSHSFAW ALQAFMRFMR GRHPQTILTD  360
IDSGLRDAIA RELPNTKHVL CIWHILSKIS SWFSLPLGSQ YENFKPEFDM LSQLESVEDF  420
EHQWNILVAR FGLVSDKHIA LLYSYRASWT FSYIRSYFLA RTLTAEFSLS LESFLKRILN  480
GQTCLQVFFE QVSIAANLEN RTREGMQYMH VKTGMPLEEH ARNILTPYAF NVLQHEIVLS  540
LQYATTEMAN GSYLVRHYKK LDGECLVIWM PDDEQIHCSC KEFEHSGILC RHSLRVLVVK  600
NYFQLPEKYF LLRWRVESSL VSVDDQNAQI SSDDCAQAFH SLTASLLTES LISKDRFNYV  660
HSELTSLLEH VRNMPVINEY AANAAANNIS ES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein