PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000130.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 495aa MW: 55617.4 Da PI: 5.4897

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000130.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1e-08	441	489	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E + l +v+q+G g+Wk+I + Rt ++k++w+++ Pav_sc0000130.1_g010.1.mk 441 NKWSSLEVDTLRAGVEQYGVGRWKLILTSNQdifGERTQVDLKDKWRNL 489 58******************************99*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MDPATEETPD LAKSENLGLF LRIRPLLQSG VRGDRNPRFR RKSAFEPWFQ KMCLRVKTSR 60 SVTLSPPLAL ERGRTKTEVY NGFSQVFSPD SSQEEVYEKM MSPLVEDFLK GNSGMLAAFG 120 PSGSGKTHTI FGCNSQPGMV TLALQQIFKE TSDSARCEGG KEERAFDLSP NGVDLTMHRS 180 TLKGLHEVVI SDWRHGEFVI SQALLRRATS PTNTNSQSSR SQCVINLRIV DDKSNGEVKD 240 QANDGVLSIV DLAGAEREKR TGNQGVRLLE IFIGASEESN EAIGEALPGL FVDQVPESLH 300 GRQEKDGVDL NSESRRRRLS QYVLPAKTSL TVYGDQEAEQ KIQHLSESNL ELEKELKDLK 360 SLIEVQRLAD DQVAEEIQRL RESNLELEKE VKDLKSLIDV QISGDDQLDD SVVEDLPSPN 420 KNAISPSKED NDRLARRRKV NKWSSLEVDT LRAGVEQYGV GRWKLILTSN QDIFGERTQV 480 DLKDKWRNLI RRNTH

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MDPATEETPD LAKSENLGLF LRIRPLLQSG VRGDRNPRFR RKSAFEPWFQ KMCLRVKTSR  60
SVTLSPPLAL ERGRTKTEVY NGFSQVFSPD SSQEEVYEKM MSPLVEDFLK GNSGMLAAFG  120
PSGSGKTHTI FGCNSQPGMV TLALQQIFKE TSDSARCEGG KEERAFDLSP NGVDLTMHRS  180
TLKGLHEVVI SDWRHGEFVI SQALLRRATS PTNTNSQSSR SQCVINLRIV DDKSNGEVKD  240
QANDGVLSIV DLAGAEREKR TGNQGVRLLE IFIGASEESN EAIGEALPGL FVDQVPESLH  300
GRQEKDGVDL NSESRRRRLS QYVLPAKTSL TVYGDQEAEQ KIQHLSESNL ELEKELKDLK  360
SLIEVQRLAD DQVAEEIQRL RESNLELEKE VKDLKSLIDV QISGDDQLDD SVVEDLPSPN  420
KNAISPSKED NDRLARRRKV NKWSSLEVDT LRAGVEQYGV GRWKLILTSN QDIFGERTQV  480
DLKDKWRNLI RRNTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	1e-11	MYB_related family protein