PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000103.1_g1460.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 454aa MW: 49915.5 Da PI: 6.9286

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000103.1_g1460.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.8e-16	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+ ++++a k++G g W+ I +++g ++t+ q++s+ qk+ Pav_sc0000103.1_g1460.1.mk 59 REKWTEEEHHKFLEALKLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MAVEDHSEAT GSNASVAAAD CSLKGDAQSK PAIELKEISS FGNDHTPKIR KPYTITKQRE 60 KWTEEEHHKF LEALKLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVSKE LSGPSEGSIT 120 PIEIPPPRPK RKPVHPYPRK SVDSLIGSPE RSPSPHFSVS GKSQESPTSV LSALGSDVLG 180 SAALDQHSRS ATPTSCTTDM RSTILSHVEK ENDYMTSNSS TEEVKESVPS VQLSADSTPE 240 KFACMKHGSG SNHVVNTEGD AGSPRASPSI KLFGRTVLVS DLERQSPPGS VTEDSKAKQE 300 NCQRENDMLA QTLRLDELDT RLSLGGIVEH QKQSPNSQKV NPDAHQPWWF MHHGLIPFFQ 360 VRSCNENSVQ IHANSLADET MKETETSLSH DGSVSAVENL AEKHLEAADA LREETQSLPC 420 SSRKGFAPYK RCLADRNMNS SGEMRDRQRA RVCS

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MAVEDHSEAT GSNASVAAAD CSLKGDAQSK PAIELKEISS FGNDHTPKIR KPYTITKQRE  60
KWTEEEHHKF LEALKLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVSKE LSGPSEGSIT  120
PIEIPPPRPK RKPVHPYPRK SVDSLIGSPE RSPSPHFSVS GKSQESPTSV LSALGSDVLG  180
SAALDQHSRS ATPTSCTTDM RSTILSHVEK ENDYMTSNSS TEEVKESVPS VQLSADSTPE  240
KFACMKHGSG SNHVVNTEGD AGSPRASPSI KLFGRTVLVS DLERQSPPGS VTEDSKAKQE  300
NCQRENDMLA QTLRLDELDT RLSLGGIVEH QKQSPNSQKV NPDAHQPWWF MHHGLIPFFQ  360
VRSCNENSVQ IHANSLADET MKETETSLSH DGSVSAVENL AEKHLEAADA LREETQSLPC  420
SSRKGFAPYK RCLADRNMNS SGEMRDRQRA RVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	5e-55	MYB_related family protein