PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000095.1_g1600.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 294aa    MW: 33929.7 Da    PI: 4.3985
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000095.1_g1600.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.31.4e-2361361128
                         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknra.. 77 
                                 +p+G+rF P++eel+ +yL ++++g++ +   v++++d+y + ePw++ + +++   +++++y F++ +kk+++g+r  r+  
  Pav_sc0000095.1_g1600.1.br   6 VPVGYRFTPSEEELLLHYLFPRMNGEDYPK-GVVPDCDLYGTkEPWEIWRDFHSspdDQEDIYVFTTLKKKTPNGSRFCRTvg 87 
                                 599************************999.99*******9879****75333333356688****************99545 PP

                         NAM  78 .tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                  t +g+Wk   + k++ + +g+++g++k + + +  +p+    +W+m e++l
  Pav_sc0000095.1_g1600.1.br  88 aTGTGVWKGEDSGKKIRA-RGSDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 136
                                 5889*************9.9999**********655555..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGGYQVPVGY RFTPSEEELL LHYLFPRMNG EDYPKGVVPD CDLYGTKEPW EIWRDFHSSP  60
DDQEDIYVFT TLKKKTPNGS RFCRTVGATG TGVWKGEDSG KKIRARGSDI GIRKRFRYMN  120
PGSPHDDRWI MLEFQLDESL VRVRNKETIV LCLVRKKETS GKSKLEERQN HEVDMASHGE  180
IQAQHVHDDQ QQHIDAITYD QIRFVDDYLM NDVEGEQDTM VNPSLLAQYD QQDVVGTSTE  240
DELRVLEDFL MNDVEGEPDN MVNPALLAQY GQQGTSIEDQ LRFFEDYLMS DIEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.12e-22NAC family protein