PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000095.1_g1360.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 152aa MW: 17168.3 Da PI: 6.9073 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.8 | 4.7e-15 | 6 | 87 | 1 | 79 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknratk 79 +p+G+rF P++eel+ +yL ++++g++ + v++++d+y + ePw++ + +++ +++++y F++ +kk+++g+r r++ Pav_sc0000095.1_g1360.1.br 6 VPVGYRFTPSEEELLLHYLFPRMNGEDYPK-GVVPDCDLYGTkEPWEIWRDFHSspdDQEDIYVFTTLKKKTPNGSRFCRTVG 87 599************************999.99*******9879****75333333356688******************755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MGGYQVPVGY RFTPSEEELL LHYLFPRMNG EDYPKGVVPD CDLYGTKEPW EIWRDFHSSP 60 DDQEDIYVFT TLKKKTPNGS RFCRTVGATG LDKSEVIGDC GSRSFYLRKS SSNHSSNKGG 120 INFFHLLSRS CESKLSSTGG MPCLLTPEFF RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 2e-13 | NAC family protein |