PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000094.1_g530.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 237aa MW: 27518 Da PI: 9.4673 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.3 | 2.6e-18 | 10 | 140 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atk 79 frFhPtd+e++ L k v +++ ++ + ++++ d++ + ePw++ + + + ++++yf ++ ++ + +g+r++r + Pav_sc0000094.1_g530.1.br 10 AFRFHPTDQEIIRSILYKMVVEREplnTTYKGIVHDEDLFGTkEPWKIWEDYGGdqlYDQDLYFLCQLKRLNFSGSRTHRkVGC 93 69*****************988887754555679999*998779****75333322255689******************5556 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g Wk+ +k v++ + + +g + L + + ++ ++ W ++ey+l Pav_sc0000094.1_g530.1.br 94 EGSWKEGVASKLVYDGNANPIGRIRQLRYKN--PKSEHHGGWYLDEYSL 140 ***************9999**********84..4444599*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MADSRHVSLA FRFHPTDQEI IRSILYKMVV EREPLNTTYK GIVHDEDLFG TKEPWKIWED 60 YGGDQLYDQD LYFLCQLKRL NFSGSRTHRK VGCEGSWKEG VASKLVYDGN ANPIGRIRQL 120 RYKNPKSEHH GGWYLDEYSL FVGDDGHDQT TPGINFVICR LRKNHRSSRL RAGVDKKTNK 180 APQQINESKR KSMNVIINID DEEVPHGCSK NARTRESFRK RGSFFSPEFL SFPTALF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 2e-11 | NAC family protein |