PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000094.1_g510.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 351aa MW: 40222.3 Da PI: 8.5267

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000094.1_g510.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.9	5.1e-50	18	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppGf+FhP+deel+v+yL++kv +++l++ + i+e+d+yk++Pw+Lpk++ +e+ewyfFs+rd+ky++g r+nra++sgyWk Pav_sc0000094.1_g510.1.mk 18 LPPGFKFHPSDEELIVHYLRNKVISHPLPA-QLITEIDLYKYNPWELPKNALFGEDEWYFFSPRDRKYPNGVRPNRAAASGYWK 100 79**************************.89***********87778999************************ PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 a +dk++l++ +++++g+kk Lvfy+grapkg+kt+W+m+eyrl Pav_sc0000094.1_g510.1.mk 101 AASSDKPILTSrGSKHIGVKKALVFYTGRAPKGVKTEWIMNEYRL 145 ****99867788*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MLSMEKESTF PSSALQLLPP GFKFHPSDEE LIVHYLRNKV ISHPLPAQLI TEIDLYKYNP 60 WELPKNALFG EDEWYFFSPR DRKYPNGVRP NRAAASGYWK AASSDKPILT SRGSKHIGVK 120 KALVFYTGRA PKGVKTEWIM NEYRLLDNTA KPSRLKGSMR LDDWVLCRVQ QRGNRSKNTC 180 NSQDSYSTEF WRYLPKVEQT QPTYANLHAD IITDFLYKDC QLLASILSGQ APSPTETNSS 240 MSFQGSKDSY EVRSSNMVKS TISISSSGID SNTLEMKTRE ENMKENHFPL INNRESKKKD 300 ENLPPSKRPT GNAINCYIPN HSQYDLLNAH PTDPTNFEEF NEMTFPGTYF E

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MLSMEKESTF PSSALQLLPP GFKFHPSDEE LIVHYLRNKV ISHPLPAQLI TEIDLYKYNP  60
WELPKNALFG EDEWYFFSPR DRKYPNGVRP NRAAASGYWK AASSDKPILT SRGSKHIGVK  120
KALVFYTGRA PKGVKTEWIM NEYRLLDNTA KPSRLKGSMR LDDWVLCRVQ QRGNRSKNTC  180
NSQDSYSTEF WRYLPKVEQT QPTYANLHAD IITDFLYKDC QLLASILSGQ APSPTETNSS  240
MSFQGSKDSY EVRSSNMVKS TISISSSGID SNTLEMKTRE ENMKENHFPL INNRESKKKD  300
ENLPPSKRPT GNAINCYIPN HSQYDLLNAH PTDPTNFEEF NEMTFPGTYF E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	3e-77	NAC family protein