PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000071.1_g840.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 508aa MW: 56787.4 Da PI: 7.8027

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000071.1_g840.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.9	5.2e-20	141	231	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k l++s+v + ++ lp f+++h + +++t+tledesg+++++k+i k++ l++GW++F+ +++L egD++vF+l Pav_sc0000071.1_g840.1.mk 141 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGKQYQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQL 218 89**********************644..678************666665....9********************9 PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 ++ ++f +v ++r+ Pav_sc0000071.1_g840.1.mk 219 VEPTKF--KVYIIRS 231 876666..9998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MGRNVGKKET QLHQGKEEKP PQTQSSKEEG HLTPAQLSKP RPRPKPNTNP KPSPLNPAKL 60 KKPNKPNKPN EKEVEHSMPM KELSNTQIKN MLGQAGKSPA LSNTQYEFPV DGSPSRGQAK 120 SSAVIQAQEV RSKLEPQFPS FVKSLVRSHV ASCFWMGLPS LFCKSHLPDK DITMTLEDES 180 GKQYQLKYIA YKTGLSAGWR QFAASHNLIE GDVLVFQLVE PTKFKVYIIR SNDLTEVDGS 240 LGLLNLDSHT KRKDAGKFID VSVYKDNAET GTVACNDATR KRAHSPPSET QKKKKIGLQP 300 VEQSEDDSEE VDSEVLEESK SPDTALHFED IQSFENFSIL VNGLLVDSEL PKDVRRKYYK 360 LCCSQNAFLH ENVVDGMNHK LVVGAISETV NIADAIKACK LTTTRDDFVS WDKYLKAFEL 420 LGMNVGFLRD RLCRLANLSN DSGAAVEARL YKEAKIERSQ AGIGIRNIEV KLEELRDVCD 480 EFGAAIESLR SKAEVYTIKF HEEVTAPW

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MGRNVGKKET QLHQGKEEKP PQTQSSKEEG HLTPAQLSKP RPRPKPNTNP KPSPLNPAKL  60
KKPNKPNKPN EKEVEHSMPM KELSNTQIKN MLGQAGKSPA LSNTQYEFPV DGSPSRGQAK  120
SSAVIQAQEV RSKLEPQFPS FVKSLVRSHV ASCFWMGLPS LFCKSHLPDK DITMTLEDES  180
GKQYQLKYIA YKTGLSAGWR QFAASHNLIE GDVLVFQLVE PTKFKVYIIR SNDLTEVDGS  240
LGLLNLDSHT KRKDAGKFID VSVYKDNAET GTVACNDATR KRAHSPPSET QKKKKIGLQP  300
VEQSEDDSEE VDSEVLEESK SPDTALHFED IQSFENFSIL VNGLLVDSEL PKDVRRKYYK  360
LCCSQNAFLH ENVVDGMNHK LVVGAISETV NIADAIKACK LTTTRDDFVS WDKYLKAFEL  420
LGMNVGFLRD RLCRLANLSN DSGAAVEARL YKEAKIERSQ AGIGIRNIEV KLEELRDVCD  480
EFGAAIESLR SKAEVYTIKF HEEVTAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	295	RKRAHSPPSETQKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	6e-37	B3 family protein