PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000069.1_g120.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 186aa MW: 20930.2 Da PI: 4.9204 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.8 | 3.4e-10 | 42 | 72 | 1 | 31 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 rg+WT++Ed+ll+d+++ +G g W+++++ Pav_sc0000069.1_g120.1.mk 42 RGPWTAQEDKLLADYIRAHGEGKWSSVSKQA 72 89**************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MTQTPPPPPP HSRKQCRRDR DRLSLIPIMG RRPCCSKEGV KRGPWTAQED KLLADYIRAH 60 GEGKWSSVSK QADPQQLSKA EDKLSNLPKY NNQNAESECS EGSLSSSSSA TTREEEDYSS 120 HDLWMNFYTR EISLSQFLDT DFSNLSNVFA EVIVGGYSST KAMHDVEADF GAQMAVFTDL 180 ADEWIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28110.1 | 2e-16 | MYB family protein |