PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000069.1_g100.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 235aa MW: 26466.4 Da PI: 7.6212 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 14 | 62 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 rg+WT+ Ed+ l d+++ +G g W++I+++ g gRt++++k++w++ Pav_sc0000069.1_g100.1.mk 14 RGAWTALEDQTLTDYIRAHGDGKWRKIPKEAGriPGRTDNEIKNYWNTT 62 89*********************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MGRTPCCSKV GLNRGAWTAL EDQTLTDYIR AHGDGKWRKI PKEAGRIPGR TDNEIKNYWN 60 TTLGKKVNCT DQQTKQSSGA VNDNTKKKRN KSTKLPTSTD KTQPSTNIAV RTKALRFNKV 120 PVTLHAQQEA TFPHHADGNH GDLVVKKKAA AANYYSSEQE DTTASEDLML DFDVGELLMS 180 GINNPDSEFW KICHQLDDNN EGSKNYKWTS SHHAPLLFSE EMLKDWMGDD DCFHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 2e-21 | MYB family protein |