PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000069.1_g080.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 231aa MW: 25950 Da PI: 4.8727 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.6 | 1.1e-16 | 14 | 63 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +g+WT+ Ed++l+d+vk +G g W++Ia +++ gRt++++k++w+++ Pav_sc0000069.1_g080.1.mk 14 KGAWTALEDQILIDYVKDHGEGrwgkLWTLIAGRLP-GRTDNEIKNYWNSV 63 79**********************************.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRIYRCEKD GLSKGAWTAL EDQILIDYVK DHGEGRWGKL WTLIAGRLPG RTDNEIKNYW 60 NSVLRKRAQE SHSERSRNEW KTTVDTEKAV PSLKMDSHLI QNGLTPTSWI NNKQLGTTNT 120 LAEPLISGVE ATNMEAKSDS SYGFLPITRE NDMTRNFIRD LNAGELGISE FLHTDFSKLC 180 ELNTTIFDCT SGCRNGSLMS TSTAEAPLYL QEWLNDWAAD DNCLPEAALG P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 5e-19 | MYB family protein |