PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000065.1_g120.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 288aa MW: 32787.5 Da PI: 4.7354 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.4 | 2.5e-18 | 7 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknra 77 p GfrF+P+dee+v+ +L + + ++k ++l + i+++++ +++eP+++ kk+ + ++++yf sk +k ++ ++ +r+ Pav_sc0000065.1_g120.1.br 7 PLGFRFSPSDEEIVDSFLYPFLVESKpfMSLYNNfIHSCNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLNKLTP-KRMDRRI 89 89******************977766585554545****9833579*****8544433335567788888877665.4566668 PP NAM 78 tksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + g+W++t ++k v++k + + +g k+ + + + + + +t W+++ey+l Pav_sc0000065.1_g120.1.br 90 GNGGTWSETESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143 999************999877666667********984..334469********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MEESLVPLGF RFSPSDEEIV DSFLYPFLVE SKPFMSLYNN FIHSCNLFGN NTEPSEIWKK 60 YGGPQLVDTD LYFISKLNKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK 120 RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKR 180 GSQDTEEKKM NTNKKMKKDD QMGSTESSSQ QGCSSSPIGG DLVEFDPIDL TIFEENTMAD 240 MEQLLGEAWS PSNFENVVSH DVDPIGETQS SQLSNWSQAI LNQLLVGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56530.1 | 1e-10 | NAC family protein |