PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000062.1_g290.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 171aa MW: 19798.4 Da PI: 8.3141 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 40 | 1.3e-12 | 82 | 170 | 1 | 71 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.................tekerrtraetrtgCkakl 66 ++Y+eY+++ GF +r+++s+k+ +r +e+t+r+fvC egk +++++ +++ ++ ++ ++gCka++ Pav_sc0000062.1_g290.1.br 82 NYYEEYGRQEGFWIRTRSSSKTrRRLDEVTSRQFVCAHEGKYVPKNTSqkaseendernlseienMKRTGKNCSTVKCGCKASM 165 69*************999888867889**************98888778899*99999999998666667788999******** PP FAR1 67 kvkke 71 ++k++ Pav_sc0000062.1_g290.1.br 166 RIKLD 170 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MFVVTDNLVV RPMSRIFELQ VLTDLNVHVT DIEDQIVHVG KNEVEEIIQV ENGETSTPKK 60 KVTQLKAPYA GMVFNTMEEA RNYYEEYGRQ EGFWIRTRSS SKTRRRLDEV TSRQFVCAHE 120 GKYVPKNTSQ KASEENDERN LSEIENMKRT GKNCSTVKCG CKASMRIKLD R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 5e-07 | FAR1 family protein |