PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000055.1_g430.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 188aa    MW: 21499.1 Da    PI: 6.0169
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000055.1_g430.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.41.3e-14456149
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk 49
                               lppGfrF Pt+eelv++yL++k+eg++      +++vi+ + iy+++PwdLp 
  Pav_sc0000055.1_g430.1.mk  4 LPPGFRFYPTEEELVSFYLQNKLEGRRedlnRVMDRVIPVLYIYEYNPWDLPL 56
                               79*************************665433344799999*********93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MEDLPPGFRF YPTEEELVSF YLQNKLEGRR EDLNRVMDRV IPVLYIYEYN PWDLPLFGRG  60
LPWRSRAVLR QEFSLCRVYK KSKCLRAFDR RPLGVEIMSN PSLNLNQTAA AHESAGHQDQ  120
GSTSHSRNPL MGSDQRRNSS SPESSSSGDH HGPQPPSQPA GETGTLPMVI DNEALWDLEQ  180
LMINNNWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.19e-15NAC family protein