PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000037.1_g500.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 139aa MW: 15588.1 Da PI: 5.6683 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.6 | 3.3e-29 | 88 | 137 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ Pav_sc0000037.1_g500.1.mk 88 PRLRWTPQLHLSFVHAVERLGGQDRATPKLVLQLMNVKGLSISHVKSHLQ 137 8************************************************* PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.6e-15 | 89 | 137 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q Pav_sc0000037.1_g500.1.mk 89 RLRWTPQLHLSFVHAVERLGGQdraTPKLVLQLMNvKGLSISHVKSHLQ 137 89**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MTNEQDYGDQ EENTSEGSSQ LKCSSFDLNK EAGSDNCDDT KFEEFELSVD EDDEKRGRGN 60 INSSTASSAE GNEGRRGKVR QYVRSKMPRL RWTPQLHLSF VHAVERLGGQ DRATPKLVLQ 120 LMNVKGLSIS HVKSHLQVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 9e-33 | G2-like family protein |