PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000028.1_g910.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 452aa    MW: 51026 Da    PI: 3.9698
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000028.1_g910.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM576.7e-1871432128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknra 77 
                                p GfrF+P+dee+v+ +L + + ++k  ++l +  i+++++  +++eP+++ kk+ +    ++++yf sk +k ++ ++  +r+
  Pav_sc0000028.1_g910.1.br   7 PLGFRFSPSDEEIVDSFLYPFLVESKpfMSLYNNfIHSCNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLNKLTP-KRMDRRI 89 
                                89******************977766585554545****9833579*****8544433335567788888877665.4566668 PP

                        NAM  78 tksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 + g+W++t ++k v++k     + + +g k+ + + +  + +  +t W+++ey+l
  Pav_sc0000028.1_g910.1.br  90 GNGGTWSETESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143
                                999************999877666667********984..334469********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MEESLVPLGF RFSPSDEEIV DSFLYPFLVE SKPFMSLYNN FIHSCNLFGN NTEPSEIWKK  60
YGGPQLVDTD LYFISKLNKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK  120
RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKR  180
GSQDTEEKKM NTNKKMKKDD QMGSTESSSQ QGCSSSPIGG DLVEFDPIDL TIFEENTMAN  240
MEQLLGEAWS PSNFEDAVSY DVDPIGETQI NFANEENTMA NMEQLLGEAW SPSNFEDAVS  300
YDVDPIGETQ INFANEENTM ANMEQLLGEA WSPSNFEDAV SYDVDPIGET QINFANEENT  360
MANMEQLLGE AWSPSNFEDA VSYDVDPIGE TQINFANEEN TMANMEQLLG EAWSPSNFEN  420
VVSHDVDPIG ETQSSQLSNW SQAILNQLLV GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.14e-10NAC family protein