PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000012.1_g130.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 102aa    MW: 11417.1 Da    PI: 5.0638
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000012.1_g130.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3352.6e-1119763795
                               EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SS.SEE..EEE CS
                         B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgr.sefelvvk 95
                               t+ + +g+ We+ +   ++s+ y   ++W+ F+ +n+Lk+gD +vF+ l+ +  +  l+v+
  Pav_sc0000012.1_g130.1.mk 19 TVLTFRGKNWEMIY--HGSSS-YKRLDNWRAFAIDNNLKVGDACVFEqLECSnARLVLRVQ 76
                               567789********..66665.55555********************55543355555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MNVVPGKFSA TLPSCSIPTV LTFRGKNWEM IYHGSSSYKR LDNWRAFAID NNLKVGDACV  60
FEQLECSNAR LVLRVQILRG DIPSEFLDKL DGDNVDAPVV LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-07B3 family protein