PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000009.1_g670.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 336aa MW: 38157.7 Da PI: 4.4109 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.5e-21 | 94 | 147 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k Pav_sc0000009.1_g670.1.mk 94 KKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 147 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 135 | 2.5e-43 | 93 | 184 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84 ekkrrl+ +qv++LE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ ke+ Pav_sc0000009.1_g670.1.mk 93 EKKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSLLSNYDSILKEN 176 69********************************************************************************** PP HD-ZIP_I/II 85 eeLreelk 92 ++L++e+ Pav_sc0000009.1_g670.1.mk 177 HKLKSEVV 184 ****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MEPCRFFFDP STTSSACQQG GGNMLFLGNA DHVFREYYLA DIVVWDVDDD DEGPRSVMGL 60 MDQESSRRRS LFSSSSSQDE LFDEEYYDEQ LPEKKRRLTP DQVHMLEKSF ETENKLEPER 120 KTQLAKKLGL QPRQVAVWFQ NRRARWKTKQ LERDYDLLKS SYDSLLSNYD SILKENHKLK 180 SEVVSINQKL EAKEETSNIK AAAFAPDHAD DDKCDPLVPA GYEMRDAVPI SYAAGLQYSC 240 SVKVEDRLSS GSGGSAVVDE AEGPQPVDSG DSYNFLNEDN VHNNYPHHHH HHSGVNSEED 300 DGSDDGRGYF SDVFAAAVEE QVQQEEGVSM GWWVWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 150 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-55 | HD-ZIP family protein |