PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000009.1_g270.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 108aa MW: 11879.1 Da PI: 4.2069 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27 | 1.1e-08 | 17 | 45 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+WT eEd++l+++++ +G g W++ a+ Pav_sc0000009.1_g270.1.mk 17 KGPWTMEEDLILINYIANHGEGVWNSLAK 45 79************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MDKKPCNSSS QDVEVRKGPW TMEEDLILIN YIANHGEGVW NSLAKAAAST SQVSISSAAV 60 DTMEITHAAP ANYPPNMDAY PSSLPADHSH ENYWSIEDLW SMQLLNGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40350.1 | 1e-19 | MYB family protein |