PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4060193.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 183aa    MW: 20038.5 Da    PI: 8.1973
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4060193.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.9e-172070256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                               +ykGVr +  +g+Wv+eIr p+    +  r++lg+++ +++Aa+a++aa+ +++ge
  Pav_co4060193.1_g010.1.mk 20 RYKGVRMRA-WGKWVSEIRLPK----SgDRIWLGSYDAPDKAARAHDAAAYCIHGE 70
                               69****998.**********94....35**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDLGTTSTSK KVRRERTPGR YKGVRMRAWG KWVSEIRLPK SGDRIWLGSY DAPDKAARAH  60
DAAAYCIHGE RAEFNFPKNR RPVFSKGSTV SLSKKDIQTI ATDFSSADVS ESTPVSSTMT  120
TQVPSDKPAS PNLLVSKGMA SAYEVDSGSF APSCATGEAV ASLENIQLDD FLMLDTDWIA  180
DFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.15e-46ERF family protein