PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_co4029521.1_g010.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 178aa MW: 19983.2 Da PI: 4.8396 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.7 | 1.9e-18 | 2 | 45 | 13 | 56 |
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k Pav_co4029521.1_g010.1.mk 2 HMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 45 68*****************************************9 PP | |||||||
2 | HD-ZIP_I/II | 121.2 | 5.2e-39 | 1 | 82 | 11 | 92 |
HD-ZIP_I/II 11 vklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 v++LE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ ke+++L++e+ Pav_co4029521.1_g010.1.mk 1 VHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSLLSNYDSILKENHKLKSEVV 82 689***************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
VHMLEKSFET ENKLEPERKT QLAKKLGLQP RQVAVWFQNR RARWKTKQLE RDYDLLKSSY 60 DSLLSNYDSI LKENHKLKSE VVSINQKLEA KEETSNIKAA AFAPDHADDD KCDPLVPAGY 120 EMRDAVPISY AAGLQYSCSV KVEDRLSSGS GGSAVVDEAE GPQPVDSGDS YNFLNEDN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 40 | 48 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 8e-47 | HD-ZIP family protein |