PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80817.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 295aa MW: 32388.3 Da PI: 8.5737

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.8	8.7e-19	146	200	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k PON80817.1 146 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 200 788899***********************************************98 PP
2	HD-ZIP_I/II	125.4	2.5e-40	146	236	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +lk PON80817.1 146 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-ALK 236 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MGFDDLCNTG LVLGLGFTAS ASSRKPSTTS TPTTTTSFEP SLTLGLPGGD PYSSSNNNNA 60 RKISNITIDV NKGGSNTSAT CLHEEPVNNN HNNIDLYRQA SPHSAVSSFS GGGRVKRERD 120 LSSEEIEVEK VSSRISDEDE DGPNARKKLR LTKEQSALLE ESFKQHSTLN PKQKQALARQ 180 LNLRPRQVEV WFQNRRARTK LKQTEVDCEF LKKCCETLTD ENRRLQKELQ ELKALKHSQP 240 LYMHMPAATL TMCPSCERIG GVGVGVGGDG ASKSLFSMAP KPHFYNPFTN PSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	195	203	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-82	HD-ZIP family protein