PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80787.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SRS

Protein Properties

Length: 308aa MW: 34099.6 Da PI: 8.6487

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	181.8	3e-56	13	189	5	153
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.............aeaaskrkrel............ 78 t++CqdCGnqakk+C++ RCRtCCks+gf+C+thvkstWvp ++rr+rqqq++++++++ +++ + ++ + PON80787.1 13 TSRCQDCGNQAKKECVYIRCRTCCKSKGFQCQTHVKSTWVPLYRRRHRQQQQQQQKHHHHHHHhllttadsstihhH-QD------Qdqdhddyqggqy 104 679*******************************************99999888887777778987765554421.22......1122223334433 PP DUF702 79 ..kskkqsalsstklssaeskkeletss...............lPeevsseavfrcvrvss......vddgeeelaYqtavsigGhvfkGiLydqGle 153 + ++l s+ s + +P+ev+++a f+ vrv+s vd++++++aYqtavsigGh+fkGiLydqG e PON80787.1 105 yfN--------PKRLRSQLSIN-----PnpssssaglgetninFPPEVKTTATFHVVRVRStvnvdgVDQNHDQYAYQTAVSIGGHLFKGILYDQGQE 189 221........22222222222.....0222335555666678********99987544433389999**********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MNMRQGGVNS GLTSRCQDCG NQAKKECVYI RCRTCCKSKG FQCQTHVKST WVPLYRRRHR 60 QQQQQQQKHH HHHHHHLLTT ADSSTIHHHQ DQDQDHDDYQ GGQYYFNPKR LRSQLSINPN 120 PSSSSAGLGE TNINFPPEVK TTATFHVVRV RSTVNVDGVD QNHDQYAYQT AVSIGGHLFK 180 GILYDQGQET ITTTTSPSTT TTYCLAGAGD RTTSAGAGGL HHQLPIDYFV NVKSHHHHHH 240 VPAGLISTVG SSASASLTAN NSSTVGADHD HHHHQPLILG SSSSSCPLLF PPNAFINPGM 300 QFFPNRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	6e-35	SRS family protein