PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80780.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

DBB

Protein Properties

Length: 316aa MW: 35233.9 Da PI: 5.752

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.6	2.6e-08	3	42	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +C+ ++++e++ fC ++ lC+ C H+ H PON80780.1 3 IRCDACDKEEASVFCSADEAALCDGCDRRVHHAnklaskH 42 58**************************997443666666 PP
2	zf-B_box	26.5	1.3e-08	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 e + C+ ++e ++ lfC++++ lC++C + +Hk Ht PON80780.1 54 ESPLCDICQERRAFLFCQEDRAILCRECDVPIHKAneHT 92 6789*****************************878865 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MKIRCDACDK EEASVFCSAD EAALCDGCDR RVHHANKLAS KHSRFSLLQP AFKESPLCDI 60 CQERRAFLFC QEDRAILCRE CDVPIHKANE HTQKHNRFLL TGVKLSASSS LYQNPSTSST 120 TTTTSSEAAT NAGSRTPFST TTKRLRTVST EISSSSSIEN PFPYGTYKLD ENNSASENGP 180 YSTSSISEYL METLPGWHVE DFLDPCSSAS INGFCKTDHN NGRSVVIMDD DDDGDFDCNN 240 SSFSSQELAN WVPQLSTQSP QNTTLYHSNN GVFYAAKADD IMMMFNFNPK WDSDACCIVP 300 RITSPPSLKR HRHFNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-74	DBB family protein