PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80004.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

CPP

Protein Properties

Length: 801aa MW: 87394.3 Da PI: 6.1317

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.9	6.4e-16	506	543	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk PON80004.1 506 CKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 543 89**********************************96 PP
2	TCR	50.5	4.1e-16	590	628	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN PON80004.1 590 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 628 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MDMDTPKKNQ IGTPVSKFED SPVFNYINSL SPIKPVKSLH ITQTFSSLSF GSLPSVFTSP 60 HVSSHKESRF LRRYSCSDPS KPELSSENGN KATTSEGIVM DTAQLYSNSS ELHENGKSEV 120 NIGEASVEPQ NEGSTFVIEL PRVLKYDCGS PDCVSMPSGV EADFATDSAD PSTSLVPHVP 180 DVPEMGSSDN EAQFQELCLS EERKQGTVYD WESLISNAAD ILIFNSPSGT EAFKGLIQNS 240 LEPVTRFCTS FAAEFSHNEI NNEHQMQIVD PVSSEQHNGE EPLSQTGDGS RLEDVEQTQD 300 RFADTNSNRG MASNQSEIKD NEDKTCVAFA CKSVFSLHRG MRRRCLDFEV AGARRKNLED 360 GSNNSSVSSQ HDEEITANEK QPGFIRPCGE SSSKRMLPGI GLHLNALATS SKDCKITKNE 420 NLSSGIQIRL PGSTVSIHSP TAGQEGLDKS LIPISSEIDN NTPENGVQLL QDASQAPGSL 480 TSEEFNQNSP KKKRRRLDNA GETEGCKRCN CKKSKCLKLY CECFAAGVYC IEPCSCQECF 540 NKPIHEDTVL ATRKQIESRN PLAFAPKVIR SSDSVPEFGD ESSKTPASAR HKRGCNCKKS 600 SCLKKYCECY QGGVGCSISC RCEGCKNAFG RKDGSVLTGT DEQDDEEAEA CEKSLVDKPL 660 QKIEIQNNEE QNPGSSLPIT PLRISRPLLP IPFSSKGKPP RSSFLTGTSS SGLYSQKHGK 720 PSILRSQPKF EKHVQTIPDD EMPEILRGDG SPTTGIKTAS PNSKRISSPH CHFGSSSPGR 780 RSGRKLILQS IPSFPSLTPQ H

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MDMDTPKKNQ IGTPVSKFED SPVFNYINSL SPIKPVKSLH ITQTFSSLSF GSLPSVFTSP  60
HVSSHKESRF LRRYSCSDPS KPELSSENGN KATTSEGIVM DTAQLYSNSS ELHENGKSEV  120
NIGEASVEPQ NEGSTFVIEL PRVLKYDCGS PDCVSMPSGV EADFATDSAD PSTSLVPHVP  180
DVPEMGSSDN EAQFQELCLS EERKQGTVYD WESLISNAAD ILIFNSPSGT EAFKGLIQNS  240
LEPVTRFCTS FAAEFSHNEI NNEHQMQIVD PVSSEQHNGE EPLSQTGDGS RLEDVEQTQD  300
RFADTNSNRG MASNQSEIKD NEDKTCVAFA CKSVFSLHRG MRRRCLDFEV AGARRKNLED  360
GSNNSSVSSQ HDEEITANEK QPGFIRPCGE SSSKRMLPGI GLHLNALATS SKDCKITKNE  420
NLSSGIQIRL PGSTVSIHSP TAGQEGLDKS LIPISSEIDN NTPENGVQLL QDASQAPGSL  480
TSEEFNQNSP KKKRRRLDNA GETEGCKRCN CKKSKCLKLY CECFAAGVYC IEPCSCQECF  540
NKPIHEDTVL ATRKQIESRN PLAFAPKVIR SSDSVPEFGD ESSKTPASAR HKRGCNCKKS  600
SCLKKYCECY QGGVGCSISC RCEGCKNAFG RKDGSVLTGT DEQDDEEAEA CEKSLVDKPL  660
QKIEIQNNEE QNPGSSLPIT PLRISRPLLP IPFSSKGKPP RSSFLTGTSS SGLYSQKHGK  720
PSILRSQPKF EKHVQTIPDD EMPEILRGDG SPTTGIKTAS PNSKRISSPH CHFGSSSPGR  780
RSGRKLILQS IPSFPSLTPQ H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	490	497	PKKKRRRL
2	491	496	KKKRRR
3	493	497	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-154	CPP family protein