PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79255.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family BBR-BPC
Protein Properties Length: 279aa    MW: 30832.3 Da    PI: 10.1956
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind348.31.8e-10612791301
   GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalll 86 
                 mddd+ + rn+gyyep+  +k +lglqlmss+aerd+k     r+  + + + ++a+++rd         m++  rd ++++        ++k+l++l+
  PON79255.1   1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMAERDTKAflpgRDPTTVMVSANGAFHPRDcvvsdapvsMNY-VRDGWVNQ--------RDKFLNMLP 88 
                 9***9999*******99..************************999999************999999999999.99999999........789****** PP

   GAGA_bind  87 venslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
                 ++         +++vl++t+ ++slq+     l+++ ++ r+e+   +  + e++ ++ke+  +kkrq +  pk++k kk++k  +k++++++     +
  PON79255.1  89 ATP--------NYSVLPETSGAHSLQM-----LQPPDTQ-RDER---VGRV-EEPVVNKESGPSKKRQGGGAPKAPKVKKPRK--PKENNNSAV----P 163
                 655........4899************.....5544444.2222...3333.3466778888889999999999999999999..333333333....5 PP

   GAGA_bind 186 rskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvD 284
                 r k  kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++SvyPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+D
  PON79255.1 164 RLKPAKKSMDVVINGIDMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPID 262
                 689************************************************************************************************ PP

   GAGA_bind 285 LkdhWAkHGtnkfvtir 301
                 L++hWA+HGtnkfvtir
  PON79255.1 263 LRTHWARHGTNKFVTIR 279
                 ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG HLGLQLMSSM AERDTKAFLP GRDPTTVMVS ANGAFHPRDC  60
VVSDAPVSMN YVRDGWVNQR DKFLNMLPAT PNYSVLPETS GAHSLQMLQP PDTQRDERVG  120
RVEEPVVNKE SGPSKKRQGG GAPKAPKVKK PRKPKENNNS AVPRLKPAKK SMDVVINGID  180
MDISGIPIPV CSCTGAPQQC YRWGCGGWQS ACCTTNVSVY PLPMSTKRRG ARIAGRKMSQ  240
GAFKKVLEKL AAEGYNFANP IDLRTHWARH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-113BBR-BPC family protein