PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79169.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 506aa MW: 55513.3 Da PI: 8.5008

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.5e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H PON79169.1 6 FICEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	13.4	0.00024	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ PON79169.1 83 WKCEKCSKRYAVQSDWKAHSKTC 105 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKNNK EQPKRKVFLC PEPTCVHHDP 60 SRALGDLTGI KKHYSRKHGE KKWKCEKCSK RYAVQSDWKA HSKTCGTREY RCECGTLFSR 120 RDSLITHRAF CDTLAQETAR HPSSLNTLGG HQIYGNSHVN LGLSQMGSQF SSQQHHPSTN 180 ILRLGNPTPK LENLVHPISS NPNSFGNAPQ NLPSSTFFIP DAPNQAFQSD HNNQPFFNKS 240 LHTLSQLPDL QTNNNNSSSA DIFNLGFFSN NANTSSLRSD QFNFDENGNG TPGIFSSISD 300 HMGAGPGMSA LYGGNNSSLR QENISPQMSA TSLLQKAAQI DSTSSLVDAS SLLRSLRDSA 360 ARVANKSDLR ELSTTSFGVD IAGNENHDHL QGLMNSLANN GSSSNVFGGF INGGGASLDH 420 RQNNQNLCDQ LDQETENYNK LHQNLGVSFG SGSDKLTLDF LGVGEIVRNM QVGGMSSTNT 480 TVSSLDTQLK STQQSQLFGG TTSTLH

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKNNK EQPKRKVFLC PEPTCVHHDP  60
SRALGDLTGI KKHYSRKHGE KKWKCEKCSK RYAVQSDWKA HSKTCGTREY RCECGTLFSR  120
RDSLITHRAF CDTLAQETAR HPSSLNTLGG HQIYGNSHVN LGLSQMGSQF SSQQHHPSTN  180
ILRLGNPTPK LENLVHPISS NPNSFGNAPQ NLPSSTFFIP DAPNQAFQSD HNNQPFFNKS  240
LHTLSQLPDL QTNNNNSSSA DIFNLGFFSN NANTSSLRSD QFNFDENGNG TPGIFSSISD  300
HMGAGPGMSA LYGGNNSSLR QENISPQMSA TSLLQKAAQI DSTSSLVDAS SLLRSLRDSA  360
ARVANKSDLR ELSTTSFGVD IAGNENHDHL QGLMNSLANN GSSSNVFGGF INGGGASLDH  420
RQNNQNLCDQ LDQETENYNK LHQNLGVSFG SGSDKLTLDF LGVGEIVRNM QVGGMSSTNT  480
TVSSLDTQLK STQQSQLFGG TTSTLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-108	C2H2 family protein