PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78920.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 420aa MW: 46777.7 Da PI: 6.2374

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.5e-14	207	258	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+ PON78920.1 207 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 258 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MERLQGPINP DFLGDHMDME CLDHGIATTS SGSLRFEEEE DQACLLTPGL DDRMPFLQML 60 QSVESPSLLP LNDPSFQTRL RLQHLKKPWE MNISGSCHHN MPQLDNQIQG LEFESCVTNE 120 IIELHSPNVK SEAKDVQYLH SSSGPDQGGV SSDCNHERQP NSVENCVNDP KTTFKHTQNA 180 KSPPVSRERR KRKRTRPTKN KEEVESQRMT HIAVERNRRR QMNDHLNVLR SLMPTSYIQR 240 GDQASIVGGA IDFVKELEQL LQSLEAQKRM RKAEGGNGAD NSICSSSSSS TAAATAAAMP 300 SNGLFMSLSQ FRIGPEEENI TSLGDEVRAE TKSGAAEIEI TVIQTHVNLK IQCPRRPGQL 360 LKAIVALEDL RLAILHLNIT SSHTTVFYSF NLKIEEGCKL GSADEIAGAV HQIFRFIEGT

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MERLQGPINP DFLGDHMDME CLDHGIATTS SGSLRFEEEE DQACLLTPGL DDRMPFLQML  60
QSVESPSLLP LNDPSFQTRL RLQHLKKPWE MNISGSCHHN MPQLDNQIQG LEFESCVTNE  120
IIELHSPNVK SEAKDVQYLH SSSGPDQGGV SSDCNHERQP NSVENCVNDP KTTFKHTQNA  180
KSPPVSRERR KRKRTRPTKN KEEVESQRMT HIAVERNRRR QMNDHLNVLR SLMPTSYIQR  240
GDQASIVGGA IDFVKELEQL LQSLEAQKRM RKAEGGNGAD NSICSSSSSS TAAATAAAMP  300
SNGLFMSLSQ FRIGPEEENI TSLGDEVRAE TKSGAAEIEI TVIQTHVNLK IQCPRRPGQL  360
LKAIVALEDL RLAILHLNIT SSHTTVFYSF NLKIEEGCKL GSADEIAGAV HQIFRFIEGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	194	RRKRKR
2	208	219	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	2e-75	bHLH family protein