PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78857.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 453aa MW: 51573.6 Da PI: 6.1188

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.4	7e-22	122	218	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt++ v++Li+++ ++++ + +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ ++ d++ PON78857.1 122 KWTDNVVKLLIAVVACVGDDGMIADgegpkrksgilQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVENPALMDSM 218 7************888888865444667778899********************************************669999999888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MDSSGLGGGF LSGPNGGLLD LESSIHRHPT SQLGHSSIPH QHHMNMMSGV DSEHHPITLM 60 ELKGSTPKCV SVFGKGKAVA PMTGNHGYNM SEEDEPSYME DGSGENYDGA KGKKGSPWQR 120 MKWTDNVVKL LIAVVACVGD DGMIADGEGP KRKSGILQKK GKWKTVSKIM ISKGCHVSPQ 180 QCEDKFNDLN KRYKRLNDIL GRGTSCRVVE NPALMDSMPH LSAKAKDDVR KILSSKHLFY 240 TEMCAYHKGQ RIPDCHDIDL QGYSLPLGRC SKDNNASEEE EEAEDNHDSD DDELDNEDDN 300 NNDNDGERMG EFGDRRKVSD EDCHFWTSPQ ESFEGEMAGY FQDPTKSLWE RREWLKKQTL 360 HFQEQRVNIQ AQALELEKQR FRWLRYCSKK DRELERLRLE NERMKLENER KVLLLRQKEL 420 EIDLRRSEAS LEHSSLGVDR VQGRDQIDLG RHS

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MDSSGLGGGF LSGPNGGLLD LESSIHRHPT SQLGHSSIPH QHHMNMMSGV DSEHHPITLM  60
ELKGSTPKCV SVFGKGKAVA PMTGNHGYNM SEEDEPSYME DGSGENYDGA KGKKGSPWQR  120
MKWTDNVVKL LIAVVACVGD DGMIADGEGP KRKSGILQKK GKWKTVSKIM ISKGCHVSPQ  180
QCEDKFNDLN KRYKRLNDIL GRGTSCRVVE NPALMDSMPH LSAKAKDDVR KILSSKHLFY  240
TEMCAYHKGQ RIPDCHDIDL QGYSLPLGRC SKDNNASEEE EEAEDNHDSD DDELDNEDDN  300
NNDNDGERMG EFGDRRKVSD EDCHFWTSPQ ESFEGEMAGY FQDPTKSLWE RREWLKKQTL  360
HFQEQRVNIQ AQALELEKQR FRWLRYCSKK DRELERLRLE NERMKLENER KVLLLRQKEL  420
EIDLRRSEAS LEHSSLGVDR VQGRDQIDLG RHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	3e-69	Trihelix family protein