PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77374.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 628aa MW: 71577.2 Da PI: 6.2773

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.9	6.8e-29	434	520	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 rW+++ev aLi++r ++e ++++ lk+p+Weevs+ m++ g++rs+k+Ckekwen+nk+++k+k+++ + + ++ +tc++fdql+ PON77374.1 434 RWPRSEVEALIQVRISLELKFQEPGLKGPRWEEVSALMASMGYKRSAKRCKEKWENINKYFRKTKHSSATKgSHQNAKTCSHFDQLD 520 8***************************************************************98877699**********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MQSNYEIAEI IPEQPQFMDS DCSSPVVFPL TNPSIQNHHY PLRHHHHQDH DNHNHCLLHP 60 HQPMHQHHQN SHVLLNRPVQ YSSSSIATPF THQFFQPWQR RVEEQETVRP NYQSHVVRAP 120 QLNFKLGLNE NSTSSINNAP FALGGGDSYL LGGNQQFHHF PEKQTHFVES KSNYCWQAQE 180 YSTAKEPFWN SVAADISVLN TDNDKSSRVD VGEICKELEN KYRLNEELEA IHSLAQIGEV 240 NNTGSGSALT GEESPSLADV SVPAPSRDIP CDGGANVSGT HGSTDEEASI GEEASLMKKH 300 CNKKRKRKTK GLALLSSMTR FFEGLVKQVM GHQDRLHGNF MESIERIDKE RREREEAWRR 360 EEAQTHNREA IARVLEQALA SNREARIVSH IEKITGQRVN LPSRNIAPLL LKPDLVNESL 420 EESMPIDAFD TNGRWPRSEV EALIQVRISL ELKFQEPGLK GPRWEEVSAL MASMGYKRSA 480 KRCKEKWENI NKYFRKTKHS SATKGSHQNA KTCSHFDQLD QLYSRTTPHN YDVSSSSSHC 540 SKPLVDGFGA QSQSYIELLE AFSARKDDVG VTQRILSSGN FEMAEIGSGK LDFEVHFHEN 600 VEFEREDHDR RKVNHVEDED FEDEIDED

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MQSNYEIAEI IPEQPQFMDS DCSSPVVFPL TNPSIQNHHY PLRHHHHQDH DNHNHCLLHP  60
HQPMHQHHQN SHVLLNRPVQ YSSSSIATPF THQFFQPWQR RVEEQETVRP NYQSHVVRAP  120
QLNFKLGLNE NSTSSINNAP FALGGGDSYL LGGNQQFHHF PEKQTHFVES KSNYCWQAQE  180
YSTAKEPFWN SVAADISVLN TDNDKSSRVD VGEICKELEN KYRLNEELEA IHSLAQIGEV  240
NNTGSGSALT GEESPSLADV SVPAPSRDIP CDGGANVSGT HGSTDEEASI GEEASLMKKH  300
CNKKRKRKTK GLALLSSMTR FFEGLVKQVM GHQDRLHGNF MESIERIDKE RREREEAWRR  360
EEAQTHNREA IARVLEQALA SNREARIVSH IEKITGQRVN LPSRNIAPLL LKPDLVNESL  420
EESMPIDAFD TNGRWPRSEV EALIQVRISL ELKFQEPGLK GPRWEEVSAL MASMGYKRSA  480
KRCKEKWENI NKYFRKTKHS SATKGSHQNA KTCSHFDQLD QLYSRTTPHN YDVSSSSSHC  540
SKPLVDGFGA QSQSYIELLE AFSARKDDVG VTQRILSSGN FEMAEIGSGK LDFEVHFHEN  600
VEFEREDHDR RKVNHVEDED FEDEIDED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	303	308	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	2e-31	Trihelix family protein