PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON76653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 227aa MW: 24888.6 Da PI: 5.7957 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.2 | 3.7e-08 | 4 | 26 | 23 | 46 |
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W+ Ia+ ++ gRt++++k++w++ PON76653.1 4 RWSVIASQLP-GRTDNDVKNYWNT 26 4*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MVVRWSVIAS QLPGRTDNDV KNYWNTKLKK KLLAGKISLI TTNTSSNPIP ASTSTTTDHL 60 ISGSKPSFQP PILVPNLQTL TENSSLSCPN SQTATLRMLS ADINYNVPGL SVYDQRLSFN 120 NSVMDFTDHQ FDHVNSKKNR DIINGSLSQE VLSISHSSNS IAPASDHHTL LPEISGCDEY 180 SDGTTTSMDF GFGLSPYDNI VSDVSFEEKA AYNSMSLADH QSIINHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56110.1 | 2e-14 | MYB family protein |