PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76225.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 447aa MW: 51349.3 Da PI: 6.7979

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.1	3.1e-25	121	217	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v++Li+a++++ e+ + ++ +kk++W++vsk+m+erg ++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d + PON76225.1 121 KWTDKMVKLLITAVSYIVEDAGPDCsvagrrkfsvlQKKGKWKSVSKVMAERGSHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCQVVENPALLDVI 217 7************999999998888888999999********************************************569999888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEGHLSHGGM IPSGASYGGL DLQGSMRAHH QGQHPHNIHQ QHHPHQCQTS SVHSSIREGF 60 PLTMGTLHNC GQTMSMVDYN KGERSKNSAS EEDEPSFTEE GVDGHNEVSK GKKGSLWQRV 120 KWTDKMVKLL ITAVSYIVED AGPDCSVAGR RKFSVLQKKG KWKSVSKVMA ERGSHVSPQQ 180 CEDKFNDLNK RYKRLNDMLG RGTSCQVVEN PALLDVIDYL TEKEKDDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPHDPALQ RSLQLALRSK DDHDNEDVRK HQHDDHDEED QEVETDEHED 300 LEDNNASHGD RGIYGLLGDS GKRFRPGQSR EDISFGNSLN IQDCNKSSYS QAQLAQTDIN 360 QALPDGTKVA WLQKQWIESR FLQLEERKLQ IQVEMLELEK QRLKWQRFTK KRDRELEKLK 420 MDNERMKLEN ERMALELKRK EMGGSFT

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEGHLSHGGM IPSGASYGGL DLQGSMRAHH QGQHPHNIHQ QHHPHQCQTS SVHSSIREGF  60
PLTMGTLHNC GQTMSMVDYN KGERSKNSAS EEDEPSFTEE GVDGHNEVSK GKKGSLWQRV  120
KWTDKMVKLL ITAVSYIVED AGPDCSVAGR RKFSVLQKKG KWKSVSKVMA ERGSHVSPQQ  180
CEDKFNDLNK RYKRLNDMLG RGTSCQVVEN PALLDVIDYL TEKEKDDVRK ILSSKHLFYE  240
EMCSYHNGNR LHLPHDPALQ RSLQLALRSK DDHDNEDVRK HQHDDHDEED QEVETDEHED  300
LEDNNASHGD RGIYGLLGDS GKRFRPGQSR EDISFGNSLN IQDCNKSSYS QAQLAQTDIN  360
QALPDGTKVA WLQKQWIESR FLQLEERKLQ IQVEMLELEK QRLKWQRFTK KRDRELEKLK  420
MDNERMKLEN ERMALELKRK EMGGSFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-180	Trihelix family protein