PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76219.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 641aa    MW: 72161.8 Da    PI: 7.1131
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.97.4e-3074157186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW++qe+laL+++r++m+ ++r+++lk+plWeevs+k+ + g++rs+k+Ckek+en+ k++k++keg+ ++t  + +t+++fdql 
  PON76219.1  74 RWPRQETLALLKIRQDMDATFRDSSLKGPLWEEVSRKLTALGYKRSAKKCKEKFENVYKYHKRTKEGRAGKT--DGKTYRFFDQLA 157
                 8********************************************************************975..5556******96 PP
2trihelix104.95.7e-33445530187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k ev+aLi++rr++e ++++   k+plWee+s+ mr+ g+ rs+k+Ckekwen+nk++kk+k+++kkr se+s+tcpyf+ql+a
  PON76219.1 445 RWPKTEVQALINLRRSLELKYQEIGPKGPLWEEISAGMRKLGYDRSSKRCKEKWENINKYFKKVKDSNKKR-SEDSKTCPYFHQLDA 530
                 8*********************************************************************8.89999********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    
MGDASIEAPV ATAAVPMMAV AAEDQVVLRH EEDSGEGEAG VEANLSTNSA EEDNKGGQNV  60
DEGGGGDRSS GGNRWPRQET LALLKIRQDM DATFRDSSLK GPLWEEVSRK LTALGYKRSA  120
KKCKEKFENV YKYHKRTKEG RAGKTDGKTY RFFDQLAAFE QNHHPPPPQP PPKPQVISTP  180
PTPWTTNPPP TSTTTSTTTH VSYHITLQNP TTNIPSLPVV VPPPPLSLPL PTSTTTTNNN  240
NNNNNPKITN INTNNISVFP PQTKPTNHNL HSSFPVAAGG GTNNNLFPSS STSSSTASDE  300
EFQARGHKRK RKWRDFFRKL TKEVIRKQEE MQKKFIEAVE KSEHARIARE EAWRVQEMAR  360
VNREHEILVQ ERSTAAAKDA AVITFLQKVS GVPQNNSNEL LLIHDNHRDN SNSLAPPPAP  420
SRLSDYGENG NAVAAAPPVI RSSSRWPKTE VQALINLRRS LELKYQEIGP KGPLWEEISA  480
GMRKLGYDRS SKRCKEKWEN INKYFKKVKD SNKKRSEDSK TCPYFHQLDA LYREKTTVKK  540
NVVQNSKGIS EKTHFGMEPL MVQPERQWPE SSDHNHHHEE DDDEDEEERD SSSTELEEDH  600
PNHNHNIRDD HDRRHDHHQQ EDGAGSFPIV DNKQSSMDMV E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117125KRSAKKCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.25e-76Trihelix family protein